Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015861375.1_cds_XP_016514946.1_27343
CDS Infomation

[gene=LOC107831675] [db_xref=GeneID:107831675] [protein=protein tesmin/TSO1-like CXC 5 isoform X2] [protein_id=XP_016514946.1] [location=join(66745..66884,68813..68923,70431..70608,72681..73037,73334..73434,73509..73603,79413..79832,83893..84140)] [gbkey=CDS]
Sequence

ATGCCGGAGCAAACAAAGCAGATTCAACCGCTTGTGAAATCAATACAACTGCAAAGGCCA
CAGACGCAGCAACATATGGTGTTAATGCCGACGAAACAAACTGCGGTGCCGACTACTCAT
CCTTCAATACGACCTCCTCTGAAACCAGATTCTCCAAGAGCACGGCCAAGGCAAAGTGCT
AGTGAGGTAAAAGATGGTACTCCTAAAAAGCAGAAGCAGTGTAACTGCAAACACTCTCGA
TGTCTAAAGTTGTATTGTGAATGCTTTGCATCTGGCATATACTGTGATGGGTGCAATTGT
AACAATTGTCATAATAATGTTGAAAATGAGCCTGCTAGACGTGAGGCAGTTGAAGCTACT
TTAGAGCGTAATCCACATGCATTCAGGCCTAAAATCGCCAGCAGTCCGCATGGAGCTCGA
GATAATAAGGAGGAAATTGGGGATGTCTTAGTCTTGGCAAAGCATAACAAAGGATGCCAC
TGCAAGAAATCAGGTTGCCTCAAGAAGTATTGTGAGTGCTTCCAAGCCAACATTCTTTGC
TCTGAAAATTGTAAATGCATGGACTGCAAAAATTTTGAAGGAAGTGAAGAGAGGCAGGCT
CTTTTCCATGGAGATCATGCAAACAACATGGCATATCTCCAGCAGGCGGCAAATGCTGCT
ATCACAGGGGCCATTGGATCCTCTGGTTATGGATTGTCTCCTGTGAACAAGAAAAGAAAG
GGCCAGGAGCTGTTCTTTGGGTCATCAGTTAAGGAACCTGTTCACAGGCATGGACAATCC
CAACAGGGGAACCATATCAAGGCTTCTGTCCTACCTTCATTATCTTCAGTTCCTGGTCCT
TGTGTTGGAAATGCTGCAACAGTGGGTCCTTCCAAGTTTACTTACAGGTCTCTGTTGGCA
GACCTCATCCAACCACAAGACTTGAAGGAACTTTGCTCAGTTTTAGTTTTACATTCAGGA
GAAGCAGCAAAGATGCTGGCAGATGAAAAGGATGCTTCAATAAAACAGGCTGAGGGGCAG
AGAGAAGCTTCCTTGGCTTCATCAACTCAGGAGCGAGTACAAAACCAGAAAGATTCTGGT
ACTGAGAAGGATATGCTTGACTGTTGTTCAAGTGGGGACCAGGGTGAGAAAATCAGTGTG
GAAGAGTCTAGTTTGGATGGTGCTGATGTATCAAAAAGGCCAATGTCGCCAGGGACGTTA
GCACTAATGTGTGATGAATCACACACCATGTTTTCAGCTGCTGTTGCTTCCCCTAATGAC
CTAGCGACTCTTAACTGTAATACATCTTCTCAATTGCCCCACGGGCAGGGCATGACCGAG
ACGTATGCAGAACAAGAAAGAATCGTGTTGATGAAATTTCGTGATTGTCTTAATAGGCTT
GTCGATTTAGGACAACTAAAAGAACGAAAATGTTCTTCAATGATCCGAGGTGCTGACCCC
GTCGATCAAAAAGATATGATTGGTAATGGTTTTACTACGACTGAAATGAGGAATCAGCAT
GATTCCTTAAACAATGGTGTTGCCAAGTCTGCTCTTCCTCAGCCAAGAACAACTCAGTTG
TTTAGTGCAGTAGTAACTACTGCTAATAATAATCCATTTCCTAAAGTTCATCGTCCAGAT
GAGAATGGGGATGTCAAACCAAAAATCTGA

Peptide Sequence

PEP ID

XP_016514946.1
PEP Infomation

PREDICTED: protein tesmin/TSO1-like CXC 5 isoform X2 [Nicotiana tabacum]
Sequence

MPEQTKQIQPLVKSIQLQRPQTQQHMVLMPTKQTAVPTTHPSIRPPLKPDSPRARPRQSA
SEVKDGTPKKQKQCNCKHSRCLKLYCECFASGIYCDGCNCNNCHNNVENEPARREAVEAT
LERNPHAFRPKIASSPHGARDNKEEIGDVLVLAKHNKGCHCKKSGCLKKYCECFQANILC
SENCKCMDCKNFEGSEERQALFHGDHANNMAYLQQAANAAITGAIGSSGYGLSPVNKKRK
GQELFFGSSVKEPVHRHGQSQQGNHIKASVLPSLSSVPGPCVGNAATVGPSKFTYRSLLA
DLIQPQDLKELCSVLVLHSGEAAKMLADEKDASIKQAEGQREASLASSTQERVQNQKDSG
TEKDMLDCCSSGDQGEKISVEESSLDGADVSKRPMSPGTLALMCDESHTMFSAAVASPND
LATLNCNTSSQLPHGQGMTETYAEQERIVLMKFRDCLNRLVDLGQLKERKCSSMIRGADP
VDQKDMIGNGFTTTEMRNQHDSLNNGVAKSALPQPRTTQLFSAVVTTANNNPFPKVHRPD
ENGDVKPKI

Transcript Sequence

Gene sequence data has not been registered.